The statistics information of human liver proteome datasets

  1.Overview of the human liver proteome datasets
  2.High quality proteome data for human liver
  3.Overlap of identified proteins from different samples
  4.Identifications within Human liver organelles and Human liver cancer cell lines
The proteomic analysis of encoding genes on human chromosome 1





High quality proteome data for human liver.


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Figure2. Features of the high quality human liver proteome data. Of all 6,847 proteins in human liver proteome datasets, 6,216 (90.8%) were identified by two or more unique peptides, and 4,297 (62.8%) were identified by 5 or more unique peptides (Figure 2A). There are 3,963 proteins (57.9%) with 20% or higher protein coverage, and 1,548 proteins (22.6%) with 50% or higher protein coverage (Figure 2B). With 1% protein false discovery, the distribution of Mascot ion scores of peptides belonging to 631 one-peptide-hit proteins (average Mascot ion score 77.3) are obviously higher than that of other peptides (average Mascot ion score 64.5) (Figure 2C).